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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs10873264 chr14:74503333 A/G 8.94E-8 399 6.83 19.77 15.03 KM Plot
LGG rs10875723 chr12:48417537 A/G 0.000235 395 14.57 16.47 15.78 KM Plot
LGG rs10878963 chr12:69717166 T/G 0.000132 404 14.95 14.63 17.13 KM Plot
LGG rs10878964 chr12:69720691 T/G 0.000184 403 14.95 14.77 18.2 KM Plot
LGG rs10886663 chr10:122071805 A/T 1.81E-9 407 11.7 15.93 15.2 KM Plot
LGG rs10897158 chr11:61165741 C/G 0.000102 407 14.5 17.7 15.63 KM Plot
LGG rs10900215 chr10:45907454 C/G 7.13E-7 407 7.8 14.53 15.63 KM Plot
LGG rs10903358 chr10:1102386 G/A 1.46E-7 392 15.97 15.03 8.97 KM Plot
LGG rs10904577 chr10:922077 A/G 2.55E-6 405 15.17 17.73 10.57 KM Plot
LGG rs10906228 chr10:12849790 A/C 0.000185 407 0 12.2 15.7 KM Plot
LGG rs10916488 chr1:224402524 C/T 0.000186 387 15.83 16.53 12.47 KM Plot
LGG rs10920135 chr1:201121835 C/T 4.49E-5 399 9.28 15.5 15.2 KM Plot
LGG rs10925109 chr1:236521008 C/T 0.000122 406 15.57 16.28 4 KM Plot
LGG rs10935964 chr3:153689185 A/G 0 405 15.03 17.37 0.23 KM Plot
LGG rs10935965 chr3:153689330 G/A 0 405 15.03 17.37 0.23 KM Plot